Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq108 95.1 1e-14
seq560 87.8 2e-12
>seq108
Length=252163
Score = 95.1 bits (104), Expect = 1e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || || || ||||| || || ||||| ||||||||||| |||||
Sbjct 247257 GCTTACCGGCGAAGATAAGACGTTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATCT 247316
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| |||| | |||| ||| || | | ||||| |||| |||| |||||| ||||
Sbjct 247317 TAGCTTTGACATTTTCAATCGTATCCGACGCTTCCACCTCGAGAGTGATGGTTTTACCGG 247376
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||||| ||||||||||||||
Sbjct 247377 TCAACGTTTTCACGAAAATCTGCAT 247401
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589
|||||||||||||| || || ||||| || |||||||| |||||| ||| | | |
Sbjct 245321 ATGAGCCGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGCCTTCACATTC 245380
Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649
|||| ||| |||| | |||||| |||| || | |||||| || || | || || |||
Sbjct 245381 TCAATCGTATCGGACGCCTCCACCTCGAGTGTAATGGTTTTACCCGTTAACGTCTTCACG 245440
Query 133650 AAAATCTGCAT 133660
||||| |||||
Sbjct 245441 AAAATTTGCAT 245451
>seq560
Length=97729
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | ||||| ||||| || ||||| ||||||||||||||||| ||||| |
Sbjct 87499 CCTGCGAATATGAGTCGCTGTTGATCGGGCGGGATGCCTTCCTTGTCTTGAATCTTCGCC 87558
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| |||| || | || | |||||| || || | || | |||||||| || ||
Sbjct 87559 TTGACATGCTGCACTGCATCAGAGGGCTCGACTTCCAACGTCAACGTTTTGCCAGTGAGC 87618
Query 133641 GTTTTTACGAAAATCTGCATG 133661
||||| ||||| || ||||||
Sbjct 87619 GTTTTGACGAAGATTTGCATG 87639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483229184080400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |