Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq108 93.3 4e-14 >seq108 Length=252163 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27107 ACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTT 27166 ||||||| | |||||||| ||||| || ||||| | |||||||| || |||||| Sbjct 248124 ACCGGCGAAGATGAGACGTTGTTGGTCAGGCGGGATGCCCTCTTTGTCCTGTATCTTGGC 248183 Query 27167 TTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 || | | | || | || |||| || || ||||| ||||| || | ||||| || || Sbjct 248184 CTTGACGTTCTCAATTGTATCTGACGCCTCCACTTCGAGAGTGATCGTCTTGCCAGTAAG 248243 Query 27227 AGTTTTCACAAAGATTTGCAT 27247 ||||||||| ||||||||||| Sbjct 248244 AGTTTTCACGAAGATTTGCAT 248264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424770177461520