Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq579 307 3e-78 seq299 228 2e-54 seq108 122 3e-22 seq51 113 1e-19 seq1742 109 2e-18 seq560 91.5 4e-13 seq726 89.7 2e-12 seq1976 86.0 2e-11 >seq579 Length=95530 Score = 307 bits (340), Expect = 3e-78 Identities = 827/1256 (66%), Gaps = 34/1256 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | |||||||| |||||||||||||| |||||||| || | ||| ||| | Sbjct 39631 GCTGTTGGAATCGACTTAGGTACTACTTACAGTTGTGTTGGAGTATTCCAATATGGTAAG 39572 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||||||||| ||||||||||| || | ||||| || || || || |||||||| Sbjct 39571 GTGGAAATAATTGCCAATGATCAAGGCAATAAGACAACACCGTCTTATGTGGCATTTACT 39512 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 |||| |||||| |||| ||| || | || | |||||| ||| ||||| ||||| Sbjct 39511 GAAAGCGAGCGTTTGATCGGTAATCCGGCTTACGATCAAGTGGCTCGAAATCCGGAAAAT 39452 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACA--AATCTACACAAT 349436 || | || ||||| ||||| | || || | | | ||| || |||| | Sbjct 39451 ACAATATTCGATGCAAAGCGCATCATAGGCCGCAAAATGGACGACCCTAAAGTACAGGAA 39392 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||| | |||| || || | | ||| | |||| ||| ||||| | || Sbjct 39391 --GATATGCGTCATTGGCCATTCAAAATCGTTTCCAAAG---GTGGGAAACCGGCTGTTC 39337 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTAC--CCGAAGAAATTTCATCAATGGT 349554 | || || | ||||||||| ||| | |||| || |||| || || ||||| ||| | Sbjct 39336 AAGTGGAGTTCAAAGGTGAA--AAACGAGTTTTCACTCCCGAGGAGATCTCATCGATGAT 39279 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | || |||||||| |||| || ||||| | | ||| |||| || || || Sbjct 39278 TCTTGTGAAAATGAAAGAAACCGCCGAAGCGTTCATCGGTCGTCCAGTGCGAGAAGCCGT 39219 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || || |||||||| ||| ||||||| || || || || ||||||| Sbjct 39218 CATCACAGTGCCGGCATATTTTAACGATAGCCAGCGTCAAGCCACGAAGGACGCTGGCAC 39159 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||||| || || ||||| | |||| || || |||||||| || || ||| | || || Sbjct 39158 GATTGCCGGCTTGAATGTGTTGCGAATCATCAACGAACCCACAGCCGCTGCACTCGCCTA 39099 Query 349735 TGGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791 ||| ||||| || | || ||| || |||| | || || ||||| ||||| || Sbjct 39098 TGGTCTTGACAAGAAGCTGCGTGGG---GATCAAAACGTGCTCATCTTTGACTTAGGCGG 39042 Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTT---TGAAGTTAAAGC 349848 |||||| || || || || | || | ||| ||| || ||| |||||| || | Sbjct 39041 TGGTACCTTCGACGTTTCGATTCTCTCGATTGCAGAAGGCTCTTTGTTTGAAGTGAAGTC 38982 Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908 || ||||||||||||||||| |||||||| ||||| ||| ||||| | || ||| Sbjct 38981 GACAGCTGGTGATACACATCTGGGTGGAGAGGATTTCGATGATCGTATGGTAAAATTTTT 38922 Query 349909 TGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || | || ||||||||| || || | ||||| | | |||| || || || | Sbjct 38921 CATTGATGAGTTTAAGCGTAAAACTGGCAAGGATATATCACGAAGTCCTCGATCATTGAG 38862 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 || || | || || || || |||||||| ||| |||| || | | || | || Sbjct 38861 ACGTCTTCGTACGGCTTGCGAGCGTGCTAAACGTACCTTGTCCAGTTCGACGGAGGCCGT 38802 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 | ||| | ||| ||| || || || | || ||| |||| || || Sbjct 38801 CGTCGAAGTGGATAGTCTCTACGAAGGAGTGGACATGAACTCGAAAATTTCACGGGCACG 38742 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || || ||||||| |||||||| | || | || ||||| | | | | Sbjct 38741 CTTCGAGGAGCTATGTATCGATCTTTTCCGGAAGACCCTCGAGCCTGTTGCGAGGGCGAT 38682 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 | ||||| | || || || ||||||||||| || | ||||||||||| || Sbjct 38681 CACCGATGCTCACTTGGATAAGCGCCAAATTGATGAAGTGATTCTGGTTGGTGGTTCCAC 38622 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268 || ||||| ||||| ||| | | ||| ||||||| || || |||||||| | | Sbjct 38621 GCGAATTCCCAAAGTGCAAAAAATGCTAGCTGAGTTCTTCAACGGCAAAGA----TTTGA 38566 Query 350269 ATCA----ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 |||| || ||||| ||||| || || |||||||| || || ||||| || | ||| Sbjct 38565 ATCATTCGATAAATCCCGATGAGGCGGTCGCATATGGGGCGGCCGTTCAAGCCGCAATTC 38506 Query 350325 TATCTGGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCAC 350381 | ||||| | || ||||| || | ||| |||| || | ||||| | || | Sbjct 38505 TTTCTGGTGTTCAG---GATAAAACTGTGAAGGATGTATTGCTTGTTGATGTGGCACCCC 38449 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAAT 350437 |||| || || | ||||| | || | || ||||| ||| ||| | ||||| Sbjct 38448 TTTCACTCGGCATTGAAACGGCCGGCGGTGTTATGACGAATCTCATTGATCGAAAT 38393 >seq299 Length=146952 Score = 228 bits (252), Expect = 2e-54 Identities = 964/1493 (65%), Gaps = 56/1493 (4%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 |||||||| | ||||| || ||| |||||| | || | || |||| | || || Sbjct 19601 GGAATCGACCTCGGTACGACGTATAGTTGTGTCGGCGTCTATCAGAATGGCCACGTCGAG 19542 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| ||||| ||||| |||| |||||| || || | ||| || || ||||| || Sbjct 19541 ATTATTGCCAATGACCAAGGCAACAAAACAACACCTTCTTTCGTCGCGTTCACCGATACG 19482 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 || ||| | ||||| ||| | || || | |||| ||| |||||| | |||||| | Sbjct 19481 GAACGTCTTATTGGAGATGCGGCTAAGGAGCAAGTGGCTCGTAATCCTGAGAATACGATC 19422 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACA--AATCTACA-CA--ATCTG 349439 || || || ||| | ||||| || || | || |||| || | || || || || Sbjct 19421 TTCGACGCGAAGAGGCTTATCGGCAGGAAGTTCGATGACCCTAAGGTGCAACAGGATATG 19362 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | ||| | || || | || ||||| ||| ||| || ||| | |||| Sbjct 19361 CGC---AAC--TGGCCCTTCAAAGTGGTTCCGAAAA---GTGGCAAGCCAGCCGTCGAGG 19310 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGTTTT 349557 | |||| ||||| || |||| | || || | ||||| || || ||||||||| | Sbjct 19309 TAGAATTCAAAGGCGAG--AAAAGGGTCTTCACGCCTGAAGAGATCTCTTCAATGGTTCT 19252 Query 349558 AGTTAAAATGAAGGAAATTGCTGA-AGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 || || ||||| || | ||| || ||| ||| | || | | || | || || || | Sbjct 19251 CGTCAAGATGAAAGAGACTGCAGAGAGC-TATCTTGGCCATCCGGTTGCCGAGGCAGTAA 19193 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || |||||||| || || || || || || || ||||| || || Sbjct 19192 TCACAGTCCCGGCCTATTTCAACGACAGTCAACGCCAGGCCACGAAGGATGCGTCCATCA 19133 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | || || ||||| || || || || ||||| || || | || || | Sbjct 19132 TTGCAGGTCTGAAGCCCCTGAGAATCATAAACGAGCCAACTGCAGCCGCGCTCGCTTACG 19073 Query 349737 GGCTTGATAAAATGAGTGACC--AAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 | ||||| || | || | | | ||||| || | ||||| |||||| | ||||| || Sbjct 19072 GTCTTGACAAGA--AGCTATCTGACGAAAAGAACGTGCTTATATTTGATCTGGGTGGAGG 19015 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAA---TTTTTGAAGTTAAAGCAAC 349851 ||||| || || || | || || | | |||||| | || ||||| || | || Sbjct 19014 GACTTTCGACGTCTCCATTCTGACTATCGCCGAGGGATCCTTGTTCGAAGTGAAGTCCAC 18955 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 ||||| ||||| ||||| ||||| |||||||||||| | ||| | ||| || |||| Sbjct 18954 AGCTGGCGATACGCATCTGGGTGGCGAAGATTTTGATGACCGTATGGTTAATCACTTTGC 18895 Query 349912 TAAAGAATT--TAAG-CGTCAAGCTAAAATTGATATTGGAG-ATAATCCTAGAGCAATGC 349967 | ||||| ||| ||| | | || | ||| || | ||| | |||||| | | Sbjct 18894 AGAGGAATTCAGAAGACGTTACGGCAA----GGACTTGAAGAAAAATGCGAGAGCACTTC 18839 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAACC 350026 |||| | ||||| ||||||||||| || ||| | | || || || || | ||| | Sbjct 18838 GTCGTTTGAGAACAGCGTGTGAACGCGCCAAGAGGACACTCTCCAGCT-CTGCGCAAGCA 18780 Query 350027 TCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086 | ||||||| || |||| || || | || ||| | || || || || Sbjct 18779 ATTGTTGAAATCGACAGTCTTCACGAAGGAATCGACTTCCATGGGAAGATCACTCGAGCA 18720 Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 || || |||||| | || ||||| ||| | ||| | || ||||| || | | Sbjct 18719 CGATTCGAAGAACTCTGCTCTGATCTGTTTCGGAAAACGCTTGAGCCTGTCGAGCAGGCC 18660 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | ||||| || ||| || || |||||| | || | |||||||| ||| Sbjct 18659 ATTCGTGATGCTCGCATCGACAAGAAGGCCATCGATGAAATTGTGCTTGTTGGTGGCTCT 18600 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || | || || || || || || |||| || || || ||||||||| | | | Sbjct 18599 ACTAGAATACCGAAGGTGCAGAAGCTACTCAGCGAATTCTTCAATGGCAAACAGCTGAAT 18540 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT-TTT 350325 || || ||||| ||||| || ||||| || ||||| || ||||| || | | | Sbjct 18539 CTTTCGATCAATCCTGATGAGGCAGTTGCTTACGGTGCCGCAGTTCAAGCTGCCGTGCTG 18480 Query 350326 ATC-----TGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCA 350380 | | | | |||||| | | || | ||||| | | ||||| |||||| Sbjct 18479 AGCGGTGTTCAAGATAAGA---CCGTGAAGGACGTTCTAT---TGGTTGATGTCACTCCA 18426 Query 350381 CTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAA-TAG 350439 || || | ||| | ||||| |||||| || |||| || ||| | |||| | Sbjct 18425 CTATCATTGGGAATTGAAACGGCTGGTG--GT-ATGA-TGACAAAATTAGTGGAAAGGAA 18370 Query 350440 TACT-GTA--CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGC 350496 |||| ||| || || ||| | ||||| || | || | | | || || ||||| | Sbjct 18369 TACTCGTATTCCAACTAAAGCAACACAAACGTTCACCACCTATTCCGACAACCAGCCTGG 18310 Query 350497 GGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGG 350556 || | |||||||| ||||| || |||||||| || || || ||||| | || Sbjct 18309 CGTCAGCATTCAAGTTTTTGAGGGCGAACGTGCGATGACGAAGGACAATAACCTGTTGGG 18250 Query 350557 AGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTC 350616 | | || ||| |||| |||||||| || | ||||||||||||||||| ||| | Sbjct 18249 AAAGTTCGACCTCAGTGGGATTCCACCCGCACCACGTGGAGTTCCTCAGATTGAGGTCAC 18190 Query 350617 TTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAA 350669 ||||||| | || |||| || ||| | |||| | ||| ||| || |||| Sbjct 18189 TTTCGATCTGGACGCAAACGGCATTATGCATGTGAGTGCATGTGACAAGTCAA 18137 >seq108 Length=252163 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| |||||||| || |||||||||||||| || |||||||||||||| ||||| || Sbjct 244894 CCAGCGAAGATTAGGCGCTGCTGATCAGGAGGTATCCCTTCTTTATCCTGGATTTTTGCC 244953 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || || | ||||| | ||| ||||| || || | |||||| ||||| | Sbjct 244954 TTGACGTTTTCGATAGTGTCAGACGCTTCCACTTCGAGCGTGATTGTCTTGCCGGTCAAC 245013 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| || || |||||||| Sbjct 245014 GTTTTCACGAAGATCTGCAT 245033 Score = 118 bits (130), Expect = 3e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || || ||||| |||||||||||||| || || |||||||| || ||||| || ||| Sbjct 247259 TTACCGGCGAAGATAAGACGTTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATCTTA 247318 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||| ||||| ||||||| ||| || | ||| || || || || | || || ||||| Sbjct 247319 GCTTTGACATTTTCAATCGTATCCGACGCTTCCACCTCGAGAGTGATGGTTTTACCGGTC 247378 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || ||||||||||| Sbjct 247379 AACGTTTTCACGAAAATCTGCAT 247401 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||||| |||||| ||||| || ||||| || || |||||||| || || || Sbjct 245843 CCAGCAAAGATTAAACGTTGTTGATCTGGCGGAATGCCCTCCTTATCCTGGATCTTCGCC 245902 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || |||| || |||| || || || || |||| ||||| || |||| Sbjct 245903 TTAACGTTCTCGATCGTGTCGGATGCCTCGACCTCCAGGGTAATGGTCTTGCCTGTTAAA 245962 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| ||||| |||||||| Sbjct 245963 GTTTTCACAAAGATCTGCAT 245982 Score = 109 bits (120), Expect = 2e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| || || || ||||| ||||| || || ||||| |||||||| || Sbjct 246226 TTACCAGCAAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCTTTGTCCTGAATCTTC 246285 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| || || | ||| |||| ||| ||||| ||||| | || || ||||| Sbjct 246286 GCCTTCACATTTTCGATTGTATCGGATGCTTCTACTTCGAGTGTGATGGTTTTACCGGTG 246345 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || || || || || |||||||| Sbjct 246346 AGGGTCTTGACGAAGATCTGCAT 246368 Score = 100 bits (110), Expect = 9e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || || ||||||||||| || || || || || || || || ||||| Sbjct 245312 CCAGCAAAGATGAGCCGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGCC 245371 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||||| ||| || | || || || ||||||| || || || |||| Sbjct 245372 TTCACATTCTCAATCGTATCGGACGCCTCCACCTCGAGTGTAATGGTTTTACCCGTTAAC 245431 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || ||||| ||||| Sbjct 245432 GTCTTCACGAAAATTTGCAT 245451 Score = 84.2 bits (92), Expect = 7e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | | ||| |||||||| || ||||||||||||||||| | Sbjct 244472 TTTGCATGCCACCGCGCAGCCGCAAAACGAGATGAAGCGTCGACTCTTTTTGAATATTGT 244531 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCA 140603 |||| || || ||||||||||| || | ||||| || ||| Sbjct 244532 AATCCGACAACGTTCGCCCATCCTCCAACTGTTTGCCTGCA 244572 >seq51 Length=344957 Score = 113 bits (124), Expect = 1e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || ||||| ||||| ||||| || ||||||||||| || || |||||||| || || Sbjct 218132 CCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATTCCCTCCTTGTCCTGAATCTTTGCC 218191 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | ||| || | || ||||| ||||| | |||||| |||||||| Sbjct 218192 TTCACATTTTCAATAGTATCCGAAGCCTCGACTTCGAGTGTTATTGTCTTACCGGTTAGG 218251 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| | || || ||||| Sbjct 218252 GTTTTGATGAAGATTTGCAT 218271 >seq1742 Length=41667 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || || || ||||||||||| || || ||||| || ||||| ||||||||||| || Sbjct 31293 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 31352 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| || |||| || || | ||| || ||||| || | || ||||| || || Sbjct 31353 TTTACATTCTCGATCGTGTCCGACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 31412 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||| ||||| Sbjct 31413 GTCTTCACAAAAATTTGCAT 31432 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || || || ||||||||||| || || ||||| || ||||| ||||||||||| || Sbjct 31597 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 31656 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| || |||| || || | ||| || ||||| || | || ||||| || || Sbjct 31657 TTTACATTCTCGATCGTGTCCGACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 31716 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||| ||||| Sbjct 31717 GTCTTCACAAAAATTTGCAT 31736 Score = 104 bits (114), Expect = 7e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || || || ||||||||||| || || ||||| || ||||| ||||||||||| || Sbjct 23012 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 22953 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| || |||| || | | ||| || ||||| || | || ||||| || || Sbjct 22952 TTTACATTCTCGATCGTGTCCAACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 22893 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||| ||||| Sbjct 22892 GTCTTCACAAAAATTTGCAT 22873 >seq560 Length=97729 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || |||||||| ||||||||||| || || || || || || || |||||||| || || Sbjct 88804 CCGGCAAAGATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGAATCTTCACT 88863 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || || | || || || || || ||||| || | ||||| || ||||| Sbjct 88864 TTAACGTTTTCGATGGTGTCGGAAGGCTCGACCTCAAGGGTGATCGTCTTCCCCGTTAGC 88923 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || ||||| | |||||| Sbjct 88924 GTCTTGACAAAGAGCTGCAT 88943 >seq726 Length=81827 Score = 89.7 bits (98), Expect = 2e-12 Identities = 133/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 349231 TTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAG 349290 |||||| | ||| | |||||| ||||| ||||| |||||||| || || ||||| | Sbjct 10046 TTGTGTGGGTGTGTTCAAAAATGGACGTGTGGAAATCATTGCAAACGACCAGGGTAATCG 9987 Query 349291 AACAACGCCATCATACGTTGCATTTAC---CGAAAC---TGAGCGTATGATTGGTGATTC 349344 | || |||||||| ||||| || || ||| || ||| ||| |||| |||||| | Sbjct 9986 TATCACACCATCATATGTTGCGTTCACAAGCGATACAGGTGAACGTCTGATCGGTGATGC 9927 Query 349345 TGCAAAAAATCAAGCTGCTGCT-AATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTA 349403 || || || ||| || | | || || | ||||||||||| ||||| || || |||| Sbjct 9926 GGCCAAGAACCAA-CTCACGATCAACCCTGAGAATACGGTTTTCGATGCCAAACGGCTTA 9868 Query 349404 TTGGT 349408 | ||| Sbjct 9867 TCGGT 9863 >seq1976 Length=37302 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 ||||| ||| |||| || || |||||||| || || | |||||| |||||||||||| Sbjct 13845 GATGCCGTTGTTACCGTGCCTGCCTATTTCAACGACTCGCAGCGTCAGGCAACAAAAGAT 13786 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 ||||| ||| |||| | || ||| | | || || || || || || |||||||| Sbjct 13785 GCTGGTGCAATTTCGGGCCTCAACGTTTTGCGTATCATCAACGAGCCAACAGCTGCAGCT 13726 Query 349727 ATTGCATATGGGCTTGATAA 349746 ||||| ||||| || || || Sbjct 13725 ATTGCCTATGGTCTCGACAA 13706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514638775813130