Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq492 86.0 6e-12 >seq492 Length=109111 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 6923 TGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCC 6982 ||||| ||||| | ||| ||||| ||||| || ||| ||| || | | ||| Sbjct 88397 TGGAATCCGTAAATCGGACCCAAATCGCCTTCGGGGCGATCCTTGAAACCTTGACTATCC 88456 Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTG 7042 || || || ||||| || | || ||||| |||||||| || | || || || Sbjct 88457 AGGAACTCACGAGATCCATTCGCATCCCAAATCTTCACACCTTTTGCTGACAGACGTTTT 88516 Query 7043 GTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACA 7102 | | ||| | || | | ||||||||||| || ||||| || ||||||||||| ||| Sbjct 88517 GCATCTGTGTCACCTTTGATGAACCACAGCAATTCTTCGACGACACCCTTCCAGTAGACA 88576 Query 7103 CGTTTCGTCGTCAGCAGCGGAA 7124 ||||||||||| || | ||||| Sbjct 88577 CGTTTCGTCGTTAGTAACGGAA 88598 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 34221 TTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGT 34280 ||||| | || |||||||||||||| ||||||||||| || ||||| || ||||||||| Sbjct 88598 TTCCGTTACTAACGACGAAACGTGTCTACTGGAAGGGTGTCGTCGAAGAATTGCTGTGGT 88539 Query 34281 TCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACG 34340 || | | || | ||| | | || || || | || |||||||| ||||| | Sbjct 88538 TCATCAAAGGTGACACAGATGCAAAACGTCTGTCAGCAAAAGGTGTGAAGATTTGGGATG 88479 Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACT 34400 | | || ||||| || || ||||| | | || ||| ||| || ||||| | Sbjct 88478 CGAATGGATCTCGTGAGTTCCTGGATAGTCAAGGTTTCAAGGATCGCCCCGAAGGCGATT 88419 Query 34401 TGGGCCCGGTCTACGGGTTCCA 34422 |||| ||| | ||||| ||||| Sbjct 88418 TGGGTCCGATTTACGGATTCCA 88397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448084719991200