Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= AC_000017.1 Length=36001 Score E Sequences producing significant alignments: (Bits) Value seq9910 147 5e-31 >seq9910 Length=263 Score = 147 bits (162), Expect = 5e-31 Identities = 83/84 (99%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 18292 GTGGTGGACCTGGCCAACCAGGCAGTGCAAAATAAGATTAACAGTAAGCTTGATCCCCGC 18351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 GTGGTGGACCTGGCCAACCAGGCAGTGCAAAATAAGATTAACAGTAAGCTTGATCCCCGC 75 Query 18352 CCTCCCGTAGAGGAGCCTCCACCG 18375 |||||||||||||||| ||||||| Sbjct 74 CCTCCCGTAGAGGAGCTTCCACCG 51 Score = 134 bits (148), Expect = 3e-27 Identities = 77/79 (97%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11180 CTGACGCGGCGGCAGATGGTGATTACGAACCCCCGCGGCGCCGGGCCCGGCACTACCTGG 11239 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 217 CTGACGCGGCGGCAGATGGTGATTACGAACCCCCGCGGCGCCGGGCCCGACACTACCTGG 158 Query 11240 ACTTGGAGGAGGGCGAGGG 11258 || |||||||||||||||| Sbjct 157 ACGTGGAGGAGGGCGAGGG 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115063850677128