Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20]
12,988 sequences; 269,559,681 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq293 105 6e-18
seq139 95.1 1e-14
>seq293
Length=269193
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|||||||| | | | ||| | ||||| || ||||| || || ||||| || || |
Sbjct 93953 CCTCCGCGAAGACGAAGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCCGAC 94012
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||||| || ||||| || || ||||||| |||||||||||||| |||
Sbjct 94013 AGGGTTCGGCCGTCCTCCAGTTGTTTGCCCGCAAAGATGAGTCGCTGCTGATCGGGCGGT 94072
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||| ||| ||| || ||| || | |||| || || | ||| |||
Sbjct 94073 ATACCCTCCTTATCTTGAATCTTGGCTTTCACATTCTCGATAGTATCGGACGCCTCCACC 94132
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| | || | || ||||| ||||| || || || ||||| ||||||
Sbjct 94133 TCCAAAGTAATTGTCTTGCCTGTCAGCGTCTTCACGAAAATTTGCATG 94180
>seq139
Length=456087
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665
|||||||||| ||||| ||||| || || ||||||||||| ||| || |||||| |
Sbjct 410153 AGATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGAATCTTCACTTTAACGT 410212
Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725
||||| |||||| | ||||||||| | ||| | ||| || || || || || || |
Sbjct 410213 TTTCGATGGTGTCGGAAGGCTCGACCTCAAGGGTGATCGTCTTCCCCGTAAGCGTCTTGA 410272
Query 118726 CAAAAATCTGCATGG 118740
|||| | ||||||||
Sbjct 410273 CAAAGAGCTGCATGG 410287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433761728443696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |