Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq96 91.5 2e-13 >seq96 Length=570248 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 |||||| ||||||||||| ||| || | || ||||| |||||||||||| ||| Sbjct 8277 TTCGAATTCGTCTCCCCAGCAATCTTCAAGACCTCTGCATTCTGCAGGACACATCAGCGA 8336 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||| | || | || ||||| | |||||| ||||| |||| ||| | | | || Sbjct 8337 CCATTTACCGTTGTCTCGAACTCGCTGCATAAACAGATCCGGAACCCATAATCCGAAGAA 8396 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 |||||| | | ||| | | ||||| || |||||| | ||||| || | | | Sbjct 8397 TAGATCACGGCATCTCTCCAACTCGTCGCCAACATTCTTCCTCAGATCCAGATATTCGAA 8456 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 ||||| | |||||| ||||||| ||| ||||| | | | || ||||| Sbjct 8457 TATATCCGCATGCCAAGGTTCCAGGTAAATGGCGAAAGCACCTGGTCG 8504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718152189060320