Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq46 109 4e-19 seq637 89.7 3e-13 >seq46 Length=806011 Score = 109 bits (120), Expect = 4e-19 Identities = 72/80 (90%), Gaps = 5/80 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| |||||||||||||||||| || |||||||| Sbjct 1364 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1305 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 1304 TAATCCATTCATGCGCGTCA 1285 >seq637 Length=111394 Score = 89.7 bits (98), Expect = 3e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 19957 AAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTT 20016 |||||||||| |||||||||||||||||||||||| ||| ||||| ||| || |||||| Sbjct 71990 AAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTGTCGGTTTCGTGGCCATATTT 72049 Query 20017 AGCCTTA 20023 ||||||| Sbjct 72050 AGCCTTA 72056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334894180789028