Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq96 82.4 1e-10 >seq96 Length=570248 Score = 82.4 bits (90), Expect = 1e-10 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 62992 TTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGA 63051 |||||| ||||||||||| || || || || ||||| | |||||||||| ||| Sbjct 8277 TTCGAATTCGTCTCCCCAGCAATCTTCAAGACCTCTGCATTCTGCAGGACACATCAGCGA 8336 Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||| | |||| || ||||| | |||||| ||||| |||| ||| | | | || Sbjct 8337 CCATTTACCGTTGTCTCGAACTCGCTGCATAAACAGATCCGGAACCCATAATCCGAAGAA 8396 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 |||||| | | ||| | ||||| || |||||| | ||||| || | | | Sbjct 8397 TAGATCACGGCATCTCTCCAACTCGTCGCCAACATTCTTCCTCAGATCCAGATATTCGAA 8456 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 ||||| | |||||| ||||||| ||| ||||| Sbjct 8457 TATATCCGCATGCCAAGGTTCCAGGTAAATGGC 8489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633529129844800