Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq10797 82.4 8e-11 seq139 82.4 8e-11 >seq10797 Length=241 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATT 138541 |||| |||||||||||||| || || |||||||| ||||| |||||| || | | Sbjct 133 AGATCAGACGCTGTTGGTCGGGTGGGATACCTTCCTTGTCCTGGATTTTCGCCTTGACAT 74 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 ||| | ||||| | |||||||| |||| || | ||| || || || || || || | Sbjct 73 TTTCGATTGTGTCCGATGACTCCACTTCGAGTGTAATCGTCTTGCCGGTTAGCGTCTTGA 14 Query 138602 CAAAAATCTGCAT 138614 |||| |||||||| Sbjct 13 CAAATATCTGCAT 1 >seq139 Length=456087 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATT 138541 |||| |||||||||||||| ||| | |||||||| ||||| |||||| || | | Sbjct 401048 AGATCAGACGCTGTTGGTCGGGACGGATACCTTCCTTGTCCTGGATTTTCGCCTTGACAT 401107 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 ||| | ||||| | |||||||| |||| || | ||| || || || || || || | Sbjct 401108 TTTCGATTGTGTCCGATGACTCCACTTCGAGTGTAATCGTCTTGCCGGTTAGCGTCTTGA 401167 Query 138602 CAAAAATCTGCAT 138614 |||| |||||||| Sbjct 401168 CAAATATCTGCAT 401180 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATT 138541 |||| |||||||||||||| || || |||||||| ||||| |||||| || | | Sbjct 409653 AGATCAGACGCTGTTGGTCGGGTGGGATACCTTCCTTGTCCTGGATTTTCGCCTTGACAT 409712 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 ||| | ||||| | |||||||| |||| || | ||| || || || || || || | Sbjct 409713 TTTCGATTGTGTCCGATGACTCCACTTCGAGTGTAATCGTCTTGCCGGTAAGCGTCTTGA 409772 Query 138602 CAAAAATCTGCAT 138614 |||| |||||||| Sbjct 409773 CAAATATCTGCAT 409785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496181831799360