Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_020078.1 Length=41796 Score E Sequences producing significant alignments: (Bits) Value seq1322 183 8e-42 >seq1322 Length=4926 Score = 183 bits (202), Expect = 8e-42 Identities = 106/109 (97%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 41688 GCACCCCTATAGTAACAGAACGGTCGAATGCGGCTTTAACGCCTTTCGTATCTGTTACGG 41747 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 GCACCCCTACAGTAACAGAACGGTCGAATGCGGCTTTAACGCCTTTCGTATCTGTTACGG 163 Query 41748 CGGTAACCCGGAGGGAAGGGAGGAGGGAGAGAGTAAGCGGAGAGGGTAA 41796 ||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 162 CGGTAACCCAGAGGGAAGGGAGGAGGGAGAGAGTAAGCGGAGAGAGTAA 114 Score = 138 bits (152), Expect = 3e-28 Identities = 96/109 (88%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 41688 GCACCCCTATAGTAACAGAACGGTCGAATGCGGCTTTAACGCCTTTCGTATCTGTTACGG 41747 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2873 GCACCCCTACAGTAACAGAACGGTCGAATGCGGCTTTAACGCCTTTCGTATCTGTTACGG 2814 Query 41748 CGGTAACCCGGAGGGAAGGGAGGAGGGAGAGAGTAAGCGGAGAGGGTAA 41796 ||||||||| ||||| |||| || ||| | ||| || || | ||| || Sbjct 2813 CGGTAACCCAGAGGGGAGGGGGGGGGGGGGGAGGGAGGGGGGGGGGGAA 2765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133604990589648