Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_020883.1 Length=50861 Score E Sequences producing significant alignments: (Bits) Value seq7604 87.8 6e-13 >seq7604 Length=352 Score = 87.8 bits (96), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 1085 CAGCAGCTTTACTGGCATTTTTCTTTGGAGGTTTTGGCGTTCACAAGTTTTATTTGAATC 1144 || || |||| | ||||| ||| |||| || |||||||| || || ||||| || | Sbjct 77 CATCATCTTTCTTAGCATTCTTCCTTGGTGGATTTGGCGTACATAAATTTTACTTAGGTA 136 Query 1145 AA---GGTCGCGGCATTTGGTATCTCATATTCTGCTGGACTTTCATTCCTGCGGTCATCG 1201 || || | || | |||||| || || |||||||| ||||| || ||| |||||| Sbjct 137 AAATAGGACAGGGATTCCTGTATCTAATTTTTTGCTGGACATTCATACCCGCGATCATCG 196 Query 1202 CGTTTATCGAGTTTATTAT 1220 ||||||| ||||||||||| Sbjct 197 CGTTTATTGAGTTTATTAT 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162608516613288