Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq293 93.3 4e-14 >seq293 Length=269193 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27107 ACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTT 27166 ||||||| | |||||||| ||||| || ||||| | |||||||| || |||||| Sbjct 97820 ACCGGCGAAGATGAGACGTTGTTGGTCAGGCGGGATGCCCTCTTTGTCCTGTATCTTGGC 97879 Query 27167 TTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 || | | | || | || |||| || || ||||| ||||| || | ||||| || || Sbjct 97880 CTTGACGTTCTCAATTGTATCTGACGCCTCCACTTCGAGAGTGATCGTCTTGCCAGTAAG 97939 Query 27227 AGTTTTCACAAAGATTTGCAT 27247 ||||||||| ||||||||||| Sbjct 97940 AGTTTTCACGAAGATTTGCAT 97960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424867136602656