Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20]
12,988 sequences; 269,559,681 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 6e-12
>seq2
Length=3257909
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 6923 TGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCC 6982
||||| ||||| | ||| ||||| ||||| || ||| ||| || | | |||
Sbjct 2627821 TGGAATCCGTAAATCGGACCCAAATCGCCTTCGGGGCGATCCTTGAAACCTTGACTATCC 2627880
Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTG 7042
|| || || ||||| || | || ||||| |||||||| || | || || ||
Sbjct 2627881 AGGAACTCACGAGATCCATTCGCATCCCAAATCTTCACACCTTTTGCTGACAGACGTTTT 2627940
Query 7043 GTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACA 7102
| | ||| | || | | ||||||||||| || ||||| || ||||||||||| |||
Sbjct 2627941 GCATCTGTGTCACCTTTGATGAACCACAGCAATTCTTCGACGACACCCTTCCAGTAGACA 2628000
Query 7103 CGTTTCGTCGTCAGCAGCGGAA 7124
||||||||||| || | |||||
Sbjct 2628001 CGTTTCGTCGTTAGTAACGGAA 2628022
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 34221 TTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGT 34280
||||| | || |||||||||||||| ||||||||||| || ||||| || |||||||||
Sbjct 2628022 TTCCGTTACTAACGACGAAACGTGTCTACTGGAAGGGTGTCGTCGAAGAATTGCTGTGGT 2627963
Query 34281 TCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACG 34340
|| | | || | ||| | | || || || | || |||||||| ||||| |
Sbjct 2627962 TCATCAAAGGTGACACAGATGCAAAACGTCTGTCAGCAAAAGGTGTGAAGATTTGGGATG 2627903
Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACT 34400
| | || ||||| || || ||||| | | || ||| ||| || ||||| |
Sbjct 2627902 CGAATGGATCTCGTGAGTTCCTGGATAGTCAAGGTTTCAAGGATCGCCCCGAAGGCGATT 2627843
Query 34401 TGGGCCCGGTCTACGGGTTCCA 34422
|||| ||| | ||||| |||||
Sbjct 2627842 TGGGTCCGATTTACGGATTCCA 2627821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448189624599360
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |