Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq96 84.2 3e-11 >seq96 Length=570248 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 77490 AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 77549 || ||||| ||||| || || |||||||| || || ||||| || | || | | | || Sbjct 5817 AGCATAAACGCATCGGCCAAACCCTGAACGCCGATGCCAATCGGCCGGTGACGCATGTTC 5876 Query 77550 GAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 |||| ||| || || |||| ||||||||||| ||| |||||||| |||||||| Sbjct 5877 GAAACTTTCGCCTCGGGAACGGGATAATAATTGCCGTCAATAATTTTGTTGAGATT 5932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694556020520320