Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2024 82.4 6e-11 >seq2024 Length=3228143 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120 |||||| ||||| | |||||| |||||||||||| || ||| |||||| | ||| Sbjct 770971 CTGAAAGCCATAAATAGGTCCCAGATCTCCTTCAGATCGATCACTGAAACCACACTGATC 770912 Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTT 102179 | ||| | ||||||||| ||||||||||| || || | |||| | ||| Sbjct 770911 AAGAAACTGCCGAGATCCATTGGCATCCCAAATCCTGACACCTTTCTCAGATAAATGCTT 770852 Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239 ||| | ||| |||| || ||||| | ||||||||||||||| ||| |||| | | Sbjct 770851 TGC-ATTTGTATCGCCTCGAATGAACCATAGCAGTTCTTCAACAACGCCTTTCCAGTAGA 770793 Query 102240 CTCTCTTAGTAGTTAAAAGTGGAA 102263 ||| || || || || | |||| Sbjct 770792 CTCGTTTGGTTGTCAATACCGGAA 770769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361207916574581