Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2089 113 4e-20 seq1299 104 2e-17 >seq2089 Length=376597 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 || ||| || || || | || |||| |||| || || ||||| ||||| ||||| || Sbjct 255376 GTATCCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATC 255435 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | || || | ||||||||||||| ||||||||| | || |||| |||||| || Sbjct 255436 GGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGG 255495 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||||||||| |||||| ||| || | ||| ||||||| | ||| Sbjct 255496 TGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTTTCGATAGTATCAGAAGCCTC 255555 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 | ||| | || ||||| || || || || || || ||||| || |||||| Sbjct 255556 CACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 255607 >seq1299 Length=73203 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 || ||| || || || | ||| |||| |||| || |||||||| ||||| ||||| || Sbjct 16553 GTATCCACCACGAAGGCGGAGAACCAGGTGCAGTGTTGACTCCTTCTGAATATTATAATC 16494 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | | || | ||||||||| || ||||||||| | || |||| |||||| || Sbjct 16493 TGATAATGTACGACCGTCCTCCAATTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGG 16434 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||||||||| || ||| ||| || | ||| ||||||| | ||| Sbjct 16433 TGGAATGCCTTCCTTGTCTTGAATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTC 16374 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 | ||| | || ||||| || || || || || || ||||| || |||||| Sbjct 16373 CACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 16322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422208606881996