Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq1299 84.2 2e-11 seq2089 82.4 6e-11 >seq1299 Length=73203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || | || || |||||||| |||||||| || |||| ||| | | Sbjct 16322 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 16381 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | |||| ||||||| || || ||||| | || |||||| Sbjct 16382 TGATACTATCGAAAACGTCAAAGCAAAAATTCAAGACAAGGAAGGCATTCCACCAGATCA 16441 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCCAAAACTATGGCCGATTAC 25211 || |||| |||||||||||||| |||||||| || || | | ||| | ||||| Sbjct 16442 GCAGCGACTGATCTTTGCGGGCAAGCAATTGGAGGACGGTCGTACATTAT--CAGATTAT 16499 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||||| ||||| || || || ||| |||| Sbjct 16500 AATATTCAGAAGGAGTCAACACTGCACCTGGT 16531 >seq2089 Length=376597 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || | || || |||||||| |||||||| || |||| ||| | | Sbjct 255607 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 255548 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || |||| ||| ||| || || ||||| | || |||||| Sbjct 255547 TGATACTATCGAAAATGTCAAAGCAAAGATTCAAGACAAGGAAGGCATTCCACCAGATCA 255488 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 || |||| |||||||||||||| || |||| || || || ||||||| || Sbjct 255487 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACATTGTCCGATTATAA 255428 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||| |||||||| || || ||| |||| Sbjct 255427 TATTCAGAAGGAATCGACGCTGCACCTGGT 255398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410747580253034