Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1299 116 3e-21 seq2089 98.7 7e-16 >seq1299 Length=73203 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 ||| || |||||||||||||| |||| ||| | || |||||||| || || ||||| Sbjct 16514 CTCCTTCTGAATATTATAATCTGATAATGTACGACCGTCCTCCAATTGCTTGCCCGCAAA 16455 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 |||| || ||||| || | || | ||||| || ||| ||||||| |||||| | Sbjct 16454 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATTTTTGCTTTGACGTT 16395 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | |||||| | | |||||| |||| || || |||||||| || |||||||| || Sbjct 16394 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 16335 Query 44110 AAATATTTGCAT 44121 ||| || ||||| Sbjct 16334 AAAAATCTGCAT 16323 >seq2089 Length=376597 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||| || ||||| || || ||||||||||||||| ||| || | || ||| Sbjct 255398 ACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCC 255457 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | || || || ||||| |||| || ||||| || | || | ||||| || ||| | Sbjct 255458 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGA 255517 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || ||| |||||| | | | |||||| | | |||||| |||| || || |||||| Sbjct 255518 ATCTTTGCTTTGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTA 255577 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || |||||||| ||||| || ||||| Sbjct 255578 CCCGTCAAAGTCTTTACAAAAATCTGCAT 255606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354735092210988