Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq8741 87.8 1e-12 seq1935 87.8 1e-12 >seq8741 Length=1017 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 3623 TTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGG 3682 ||| | |||||||||||| ||||||||||||| ||||| |||| |||||| |||||||| Sbjct 884 TTGTTTTATTTTGCTGACATATGCGCTGGTCCTGGTGGATTCACAGAATATGTGTTATGG 825 Query 3683 AGAAAGAAATGGAATATC---AAAGGTTATGGTATGACGTTA 3721 |||||| | ||| | | ||||| ||| ||||||||| Sbjct 824 AGAAAGGGTTACTATAACGCAAGAGGTTTTGGAATGACGTTA 783 >seq1935 Length=369353 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 3623 TTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGG 3682 ||| | |||||||||||| ||||||||||||| ||||| |||| |||||| |||||||| Sbjct 290007 TTGTTTTATTTTGCTGACATATGCGCTGGTCCTGGTGGATTCACAGAATATGTGTTATGG 289948 Query 3683 AGAAAGAAATGGAATATC---AAAGGTTATGGTATGACGTTA 3721 |||||| | ||| | | ||||| ||| ||||||||| Sbjct 289947 AGAAAGGGTTACTATAACGCAAGAGGTTTTGGAATGACGTTA 289906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276520464643993