Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2140 93.3 5e-14 >seq2140 Length=90006 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 62703 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762 || || || || || ||||| |||||||||||||| || || || | ||||||||||||| Sbjct 52255 AGGATGAAAGCATCAGCTAAGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 52314 Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62818 || ||| |||||||| || ||||||||||| ||| || | ||||| | ||| Sbjct 52315 GATCGTTCTGCTTCTGGTATTGGATAATAATTGCGATCAATGACCTTATTCAAATT 52370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622870647575960