Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1299 86.0 5e-12 >seq1299 Length=73203 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| |||||||| || || |||| || |||||||| || | ||| ||| | Sbjct 16322 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 16381 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || | | | || ||| ||||||| ||||| |||||| |||| ||||| Sbjct 16382 TGATACTATCGAAAACGTCAAAGCAAAAATTCAAGACAAGGAAGGCATTCCACCAGATCA 16441 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111363 || | || || | ||||||||| |||||||| || || | | ||| | |||||| Sbjct 16442 GCAGCGACTGATCTTTGCGGGCAAGCAATTGGAGGACGGTCGTACATTAT--CAGATTAT 16499 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || || || || ||||| || | || | || || || ||||| Sbjct 16500 AATATTCAGAAGGAGTCAACACTGCACCTGGTTCTCCGCCTTCGTGGTGG 16549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422989313330200