Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1299 104 2e-17 seq2089 98.7 7e-16 >seq1299 Length=73203 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031 || || || || || || || || || ||||| ||| ||| || |||| || |||| Sbjct 16525 TGCAGTGTTGACTCCTTCTGAATATTATAATC--TGATAATGTACGACCGTCCTCCAATT 16468 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091 | ||||| || | |||| ||||| || || |||||| ||||||||||| ||||| Sbjct 16467 GCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATTT 16408 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 | ||| || |||| |||||||| | || || || | || ||||||||||| | Sbjct 16407 TTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCG 16348 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| ||| ||||||||||| ||||| Sbjct 16347 TCAAAGTCTTTACAAAAATCTGCAT 16323 >seq2089 Length=376597 Score = 98.7 bits (108), Expect = 7e-16 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031 || || || || || || || || || |||||| || ||| || |||| || | | Sbjct 255404 TGCAGCGTCGATTCCTTCTGAATATTATAATCG--GACAATGTGCGACCGTCCTCCAGCT 255461 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-T 15090 | ||||| || | |||| ||||| || || |||||| ||||||||||| ||| | Sbjct 255462 GCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCT 255521 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 |||| ||| ||| |||| |||||||| | || || || | || ||||||||||| Sbjct 255522 TTGC-TTTGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCC 255580 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| ||| ||||||||||| ||||| Sbjct 255581 GTCAAAGTCTTTACAAAAATCTGCAT 255606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357349178965835