Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1299 132 4e-26 seq2089 127 2e-24 seq2629 91.5 1e-13 >seq1299 Length=73203 Score = 132 bits (146), Expect = 4e-26 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA--TCGT 45189 || || ||||| ||||| ||||| || ||||||||||| ||| | | || || | Sbjct 16531 ACCAGGTGCAGTGTTGACTCCTTCTGAATATTATAATC--TGATAATGTACGACCGTCCT 16474 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 ||||||| || || || | |||| ||| ||||| || || ||||||||||| || |||| Sbjct 16473 CCAATTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTT 16414 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||||||| ||||| ||| | || || |||| ||| |||||||| || | |||| Sbjct 16413 GAATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTT 16354 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || | ||| ||||||||||| ||||| Sbjct 16353 TACCCGTCAAAGTCTTTACAAAAATCTGCAT 16323 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 45216 CGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACG 45275 || |||||||| | || || ||||| || ||||| |||||| ||| | ||| | Sbjct 15118 CGCTGCTGGTCTGCAGGGATACCTTCCTTGTCTTGTATTTTTGCTTTAACATTTTCAATT 15059 Query 45276 GTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATT 45335 ||||| |||| ||| ||||| ||||| | |||||| || || || ||||||||||| ||| Sbjct 15058 GTGTCTGAAGCCTCCACTTCAAGAGTGATCGTTTTTCCAGTCAGTGTTTTTACAAAGATT 14999 Query 45336 TGCAT 45340 ||||| Sbjct 14998 TGCAT 14994 >seq2089 Length=376597 Score = 127 bits (140), Expect = 2e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA--TCGT 45189 || || |||||||| |||||||| || |||||||||||| ||| | | || || | Sbjct 255398 ACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCG--GACAATGTGCGACCGTCCT 255455 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 ||| || || || || | |||| ||| ||||| || || ||||||||||| || |||| Sbjct 255456 CCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTT 255515 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||| ||| ||||| ||| | || || |||| ||| |||||||| || | |||| Sbjct 255516 GAATCTTTGCTTTGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTT 255575 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || | ||| ||||||||||| ||||| Sbjct 255576 TACCCGTCAAAGTCTTTACAAAAATCTGCAT 255606 >seq2629 Length=74368 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 45201 CCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 45260 ||||| | ||||| || ||||| || || || ||||||||||| || || ||||| | Sbjct 48098 CCTGCAAAAATCAACCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGTATTTTCGCT 48039 Query 45261 TTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGA 45320 || | || | || || || || ||||| || || |||| |||||| || |||| | Sbjct 48038 TTTACATTCTCAATTGTATCTGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 47979 Query 45321 GTTTTTACAAAAATTTGCAT 45340 ||||| |||||||||||||| Sbjct 47978 GTTTTGACAAAAATTTGCAT 47959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451947654456760