Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2089 86.0 7e-12 >seq2089 Length=376597 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 46454 CCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTC 46513 || ||||| ||||| ||||||||||| | || | | |||||||||| ||| || | Sbjct 256457 CCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTTGCC 256516 Query 46514 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 || | || | | ||||| | |||||| |||| ||||| ||||| || || || Sbjct 256517 TTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAAGA 256576 Query 46574 GTTTTAACAAAGATTTGCAT 46593 |||||||||||||||||||| Sbjct 256577 GTTTTAACAAAGATTTGCAT 256596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565168939266120