Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2089 113 4e-20 seq1299 111 1e-19 >seq2089 Length=376597 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || |||||||| || || |||||||||||||| || |||| ||| |||| Sbjct 255607 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 255548 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || |||| ||||| | || ||||| || || | || ||||| Sbjct 255547 TGATACTATCGAAAATGTCAAAGCAAAGATTCAA-GACAAGGAAGGCATTCCACCAGATC 255489 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | ||| |||| |||||||||||||| || |||| || | || || ||||||||| Sbjct 255488 AGCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACATTGTCCGATTATA 255429 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762 | ||||| || ||||| || |||||| |||| Sbjct 255428 ATATTCAGAAGGAATCGACGCTGCACCTGGT 255398 >seq1299 Length=73203 Score = 111 bits (122), Expect = 1e-19 Identities = 155/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || |||||||| || || |||||||||||||| || |||| ||| |||| Sbjct 16322 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 16381 Query 28613 AGAGACGGTGGCCGATCTC-AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | | || ||||||||| || ||||| || || | || ||||| Sbjct 16382 TGATACTATCGAAAACGTCAAAGCAAAAATTC-AAGACAAGGAAGGCATTCCACCAGATC 16440 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTA 28729 | ||| |||| |||||||||||||| |||||||| || || | | ||| | ||||| Sbjct 16441 AGCAGCGACTGATCTTTGCGGGCAAGCAATTGGAGGACGGTCGTACATTAT--CAGATTA 16498 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| ||||| || || || || |||||| |||| Sbjct 16499 TAATATTCAGAAGGAGTCAACACTGCACCTGGT 16531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425353829990949