Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1299 132 9e-26 seq2089 118 2e-21 seq2629 116 7e-21 seq2168 107 4e-18 >seq1299 Length=73203 Score = 132 bits (146), Expect = 9e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| |||||||| || | || |||||||| || || |||||||| | || | Sbjct 16504 ATATTATAATCTGATAATGTACGACCGTCCTCCAATTGCTTGCCCGCAAAGATCAGTCGC 16445 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| ||||| || ||||| || ||||| ||||| ||| || || |||| | Sbjct 16444 TGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATTTTTGCTTTGACGTTTTCGATAGTA 16385 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || ||||| || || ||||||||||| || || || || | ||| |||||| Sbjct 16384 TCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGC 16325 Query 192535 ATT 192537 ||| Sbjct 16324 ATT 16322 >seq2089 Length=376597 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| || ||||| || | || |||| || || || |||||||| | || | Sbjct 255425 ATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGC 255484 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| ||||| || ||||| || ||||| || || ||| ||||| |||| | Sbjct 255485 TGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTTTCGATAGTA 255544 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || ||||| || || ||||||||||| || || || || | ||| |||||| Sbjct 255545 TCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGC 255604 Query 192535 ATT 192537 ||| Sbjct 255605 ATT 255607 >seq2629 Length=74368 Score = 116 bits (128), Expect = 7e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||| ||||| || || | ||| ||||| || ||||| |||||||| || |||||||| Sbjct 48100 TACCTGCAAAAATCAACCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGTATTTTCG 48041 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| || | |||||| ||||| || || || ||||| ||||||||||||| Sbjct 48040 CTTTTACATTCTCAATTGTATCTGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTA 47981 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 | ||||| | ||| || ||||| Sbjct 47980 AAGTTTTGACAAAAATTTGCAT 47959 >seq2168 Length=114285 Score = 107 bits (118), Expect = 4e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 192396 ACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 192455 ||| ||||| || | || |||||||||||||| || || || |||||||| |||||| Sbjct 62543 ACCTGCAAAAATAAGTCGTTGTTGATCAGGTGGAATACCCTCCTTATCTTGAATTTTAGC 62484 Query 192456 TTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 192515 || ||||| || | ||| ||||||||||| || || ||||| || || |||||||| Sbjct 62483 CTTCACATTCTCAATGGTATCGGACGATTCTACCTCAAGGGTAATCGTCTTTCCAGTTAA 62424 Query 192516 TGTTTTAATAAATATCTGCATTTT 192539 || || | ||||||||||| || Sbjct 62423 CGTCTTCACGAATATCTGCATCTT 62400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984355995206850