Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2089 120 3e-22 seq1299 114 1e-20 >seq2089 Length=376597 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| ||||| |||||| || ||| ||| |||||| ||||||||||| Sbjct 255410 GTCGATTCCTTCTGAATATTATAATCGGACAATGTGCGACC-GTCCTCCAGCTGCTTGCC 255468 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || || || |||||||||||||| |||||| || Sbjct 255469 CGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTT 255528 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | | |||||| |||| || | |||||| || |||| ||| Sbjct 255529 GACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGT 255588 Query 133643 TTTTACGAAAATCTGCAT 133660 ||||| ||||||||||| Sbjct 255589 CTTTACAAAAATCTGCAT 255606 >seq1299 Length=73203 Score = 114 bits (126), Expect = 1e-20 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| ||||| ||||| || || |||| |||||| | ||||||| Sbjct 16519 GTTGACTCCTTCTGAATATTATAATCTG--ATAATGTACGACCGTCCTCCAATTGCTTGC 16462 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| | || || |||||||| || || || |||||||||||||| ||| ||||||| Sbjct 16461 CCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCT-TGAATTTTTGCT 16403 Query 133582 T-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | || | || | || || | | |||||| |||| || | |||||| || |||| | Sbjct 16402 TTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAA 16343 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || ||||| ||||||||||| Sbjct 16342 GTCTTTACAAAAATCTGCAT 16323 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC- 133586 |||| || ||||||||||| | |||||| ||||||||||| || |||||||| | | Sbjct 15126 AAATAAGGCGCTGCTGGTCTGCAGGGATACCTTCCTTGTC-TTGTATTTTTGCTTTAACA 15068 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | |||| ||||| | | |||||| || | |||| ||||| || ||||| |||||| Sbjct 15067 TTTTCAATTGTGTCTGAAGCCTCCACTTCAAGAGTGATCGTTTTTCCAGTCAGTGTTTTT 15008 Query 133647 ACGAAAATCTGCATG 133661 || || || |||||| Sbjct 15007 ACAAAGATTTGCATG 14993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483361393626440