Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2089 123 2e-23 seq1299 105 6e-18 >seq2089 Length=376597 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || ||||||| ||| || || |||| ||||||||||| |||||||| Sbjct 255416 TCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAG 255475 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||| || | |||| || |||||||| |||||| || | | || Sbjct 255476 ATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTT 255535 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || | ||||| || | || || ||||||||||||||||| || ||| Sbjct 255536 TCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACA 255595 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 255596 AAAATCTGCATTC 255608 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 35595 TACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTT 35654 ||||||| || ||||| ||||||||||| | |||| | |||||||||| ||| ||| Sbjct 256455 TACCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTTG 256514 Query 35655 GCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 ||| | | | | | ||||| | |||||| |||| ||||| |||||||| || | Sbjct 256515 CCTTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAA 256574 Query 35715 AAGTTTTCACAAATATCTGCAT 35736 |||||| ||||| || ||||| Sbjct 256575 GAGTTTTAACAAAGATTTGCAT 256596 >seq1299 Length=73203 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||| || ||||| | || || || |||| |||| ||||| |||||||| Sbjct 16514 CTCCTTCTGAATATTATAATCTGATAATGTACGACCGTCCTCCAATTGCTTGCCCGCAAA 16455 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | |||| || |||||||| ||| |||||||| || Sbjct 16454 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCT-TGAATTTTTGCTTTGACGT 16396 Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | || || | ||||| || | || || ||||||||||||||||| || | Sbjct 16395 TTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTA 16336 Query 35724 CAAATATCTGCATTC 35738 |||| |||||||||| Sbjct 16335 CAAAAATCTGCATTC 16321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450738203101480