Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2053 91.5 1e-13 >seq2053 Length=545454 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 43894 TTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTT 43953 || ||| | ||| || | || ||||||||| ||||||||||||| | ||| || || || Sbjct 336243 TTAGGTAAATCGTTTCTCACAGGAAGTTCAAGTACCAGAAGCACGGTTTTTCTACGGTTT 336184 Query 43954 TCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 ||||||| || |||||||||||||| ||||||||| |||| |||||||| || Sbjct 336183 TCAAATTATGATCGAAAATATTCATTCTGAAATGTACTCCAAAATGATTGATACGTATAT 336124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397408378685155