Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq4 827 0.0 >seq4 Length=3628 Score = 827 bits (916), Expect = 0.0 Identities = 460/461 (99%), Gaps = 0/461 (0%) Strand=Plus/Minus Query 22113 GCCTTaaaaaaaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 22172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3286 GCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 3227 Query 22173 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 22232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3226 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 3167 Query 22233 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT 22292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3166 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT 3107 Query 22293 GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGAC 22352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3106 GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGAC 3047 Query 22353 GAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC 22412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3046 GAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC 2987 Query 22413 CACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAG 22472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2986 CACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAG 2927 Query 22473 CGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCA 22532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2926 CGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCA 2867 Query 22533 TATCACCAGCTCACCGTCTTTCATTGCCATACGGAATTCCG 22573 |||||||||||||||||||||||||||||||||||||| || Sbjct 2866 TATCACCAGCTCACCGTCTTTCATTGCCATACGGAATTTCG 2826 Score = 594 bits (658), Expect = 2e-165 Identities = 334/336 (99%), Gaps = 1/336 (0%) Strand=Plus/Minus Query 22564 CGGAATTCCGG-ATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAA 22622 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1574 CGAAATTCCGGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAA 1515 Query 22623 CTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAGCTGAACGGTCTG 22682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1514 CTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAGCTGAACGGTCTG 1455 Query 22683 GTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTTACGATGCCATTG 22742 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1454 GTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTTACGATGCCATTG 1395 Query 22743 GGATATATCAACGGTGGTATATCCAGTGAtttttttCTCCATTTTAGCTTCCTTAGCTCC 22802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1394 GGATATATCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTAGCTTCCTTAGCTCC 1335 Query 22803 TGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTCATTATGGTGAAA 22862 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1334 TGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTCATTATGGTGAAA 1275 Query 22863 GTTGGAACCTCTTACGTGCCGATCAACGTCTCATTT 22898 |||||||||||||||||||||||||||||||||||| Sbjct 1274 GTTGGAACCTCTTACGTGCCGATCAACGTCTCATTT 1239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184423267337658