Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1299 107 1e-18 seq2089 95.1 8e-15 >seq1299 Length=73203 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| ||||| ||||||||||| | ||| || |||| || | ||| || || ||||| Sbjct 16514 CTCCTTCTGAATATTATAATCTGATAATGTACGACCGTCCTCCAATTGCTTGCCCGCAAA 16455 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG- 34633 || | ||||| || || || || | || ||||||||| ||| ||||| ||| ||| Sbjct 16454 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCT-TGAATTTTTGCTTTGACGT 16396 Query 34634 ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || || || ||||||||| | ||||| |||||||| || || || || | Sbjct 16395 TTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTA 16336 Query 34694 CAAAAATCTGCAT 34706 ||||||||||||| Sbjct 16335 CAAAAATCTGCAT 16323 >seq2089 Length=376597 Score = 95.1 bits (104), Expect = 8e-15 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 34565 TACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTT 34624 |||| |||||||| | ||||| ||||| ||||| | |||||||||||| || |||| Sbjct 256777 TACCTGCAAATATAAGGCGCTGCTGGTCTGGCGGAATACCCTCCTTGTCT-TGTATTTTT 256835 Query 34625 GTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTT 34683 | |||||| | |||||||||| ||||||||| | || |||||||| || || Sbjct 256836 GCTTTAACATTTTCAATTGTGTCTGAAGCCTCCACTTCAAGAGTGATCGTTTTTCCAGTC 256895 Query 34684 AACGTTTTCACAAAAATCTGCATGTT 34709 | |||||||| || || |||||||| Sbjct 256896 AGTGTTTTCACGAAGATTTGCATGTT 256921 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| |||||||| || | ||| || |||| || || || || || ||||| Sbjct 255416 TCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAG 255475 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||||| || || || || | || ||||||||| |||||| ||| | | Sbjct 255476 ATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTT 255535 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 || || || ||||||||| | ||||| |||||||| || || || || ||| Sbjct 255536 TCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACA 255595 Query 34696 AAAATCTGCAT 34706 ||||||||||| Sbjct 255596 AAAATCTGCAT 255606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314691890574623