Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2140 86.0 9e-12 >seq2140 Length=90006 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 76084 AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 ||| || || ||||| |||| || ||||| ||||| ||||| || | |||||||||||| Sbjct 52254 AAGGATGAAAGCATCAGCTAAGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATT 52313 Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203 || ||| |||||||| || || |||||||| ||| || | ||||| | ||| | Sbjct 52314 AGATCGTTCTGCTTCTGGTATTGGATAATAATTGCGATCAATGACCTTATTCAAATTCTT 52373 Query 76204 GACAACTACTTT 76215 || || ||||| Sbjct 52374 AACTACCACTTT 52385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712846789273920