Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2089 96.9 2e-15 seq2629 87.8 1e-12 >seq2089 Length=376597 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| ||||| ||||| || || || ||||||| | | ||| |||| ||| Sbjct 255398 ACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCC 255457 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||||||||||||| || | |||||||| || Sbjct 255458 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGA 255517 Query 44249 ATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || | || | || || || | | ||||| || | || || || || Sbjct 255518 ATCTT-TGCTTTGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTT 255576 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| || || || ||||| Sbjct 255577 ACCCGTCAAAGTCTTTACAAAAATCTGCAT 255606 >seq2629 Length=74368 Score = 87.8 bits (96), Expect = 1e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| ||||| ||||||||||||| ||| | ||||| || ||| ||| ||| || Sbjct 48098 CCTGCAAAAATCAACCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGTATTTTC-GC 48040 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || || || | |||||| ||||| | ||||||||| || || || | Sbjct 48039 TTTTACATTCTCAATTGTATCTGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAA 47980 Query 44317 GGTCTTCACGAAGATTTGCATGATG 44341 || || || || ||||||||| || Sbjct 47979 AGTTTTGACAAAAATTTGCATGGTG 47955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359947267637727