Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1733 82.4 6e-11 >seq1733 Length=353299 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 || ||||| ||||| ||||| ||||| || || | |||||||||||| |||||| | Sbjct 117878 CCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTTGCC 117819 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 ||||| | | | | |||| | ||||| |||| || || || || || || ||| Sbjct 117818 TTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAAGA 117759 Query 45317 GTCTTCACAAAGATTTGCAT 45336 || || |||||||||||||| Sbjct 117758 GTTTTAACAAAGATTTGCAT 117739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394998954807535