Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13974 102 1e-16 seq961 84.2 3e-11 >seq13974 Length=826 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 79426 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 79485 || || || || || ||||| |||||||||||||| || || || | ||||||||||||| Sbjct 408 AGGATGAAAGCATCAGCTAAGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 467 Query 79486 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG 79545 || ||| |||||||| || ||||||||||| ||| || | ||||| | |||| | Sbjct 468 GATCGTTCTGCTTCTGGTATTGGATAATAATTGCGATCAATGACCTTATTCAAATTCTTA 527 Query 79546 ACTATTACTTT 79556 |||| ||||| Sbjct 528 ACTACCACTTT 538 >seq961 Length=383894 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517 || || || || ||||||||||||||| || || ||||| | || ||| ||||||||| Sbjct 143315 ACCTCATCAACGGTCCAAAATGATGCCAAGGCTTTCTTATAAAAATCCCAAATGTCATGA 143256 Query 50518 TATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | | ||| ||||| |||||||| | |||||||||| Sbjct 143255 AACTTGATAGGGAATATAACAAAACGATTTGGATTT 143220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718126627669400