Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1733 109 5e-19 >seq1733 Length=353299 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| ||||| || ||||||| |||| || |||||||||||||||| || | | Sbjct 118919 TCCTTCTGAATATTATAATCAGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAG 118860 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTT-GATAGA 48654 || | ||||||||||| || | | ||||||||| ||| || ||||| || | Sbjct 118859 ATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTT-TGCTTTGACATT 118801 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | || ||||| | || |||| |||| ||||||||||||||| || | ||| || || Sbjct 118800 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 118741 Query 48715 AAAAATCTGCAT 48726 |||||||||||| Sbjct 118740 AAAAATCTGCAT 118729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421169903125835