Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq381 87.8 1e-12 >seq381 Length=422687 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 3623 TTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGG 3682 ||| | |||||||||||| ||||||||||||| ||||| |||| |||||| |||||||| Sbjct 312942 TTGTTTTATTTTGCTGACATATGCGCTGGTCCTGGTGGATTCACAGAATATGTGTTATGG 312883 Query 3683 AGAAAGAAATGGAATATC---AAAGGTTATGGTATGACGTTA 3721 |||||| | ||| | | ||||| ||| ||||||||| Sbjct 312882 AGAAAGGGTTACTATAACGCAAGAGGTTTTGGAATGACGTTA 312841 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 3623 TTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGG 3682 ||| | |||||||||||| ||||||||||||| ||||| |||| |||||| |||||||| Sbjct 314364 TTGTTTTATTTTGCTGACATATGCGCTGGTCCTGGTGGATTCACAGAATATGTGTTATGG 314305 Query 3683 AGAAAGAAATGGAATATC---AAAGGTTATGGTATGACGTTA 3721 |||||| | ||| | | ||||| ||| ||||||||| Sbjct 314304 AGAAAGGGTTACTATAACGCAAGAGGTTTTGGAATGACGTTA 314263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276500228180005