Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1733 91.5 1e-13 >seq1733 Length=353299 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || ||||| || ||||| ||||||||||| || ||||| | |||| || Sbjct 118946 AGGCGAAGAACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCAGACAATGTGCGA 118887 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| |||||||| ||||| ||||| ||||||||||| || | || || Sbjct 118886 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCC 118827 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACT---CACACTATCAGTAGATTCGCATTCGACC 34086 |||| | | | | ||||||| || | | | | |||||| || || ||||| Sbjct 118826 TTGT-CTTGAATCTTTGCTT--TGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGT 118770 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| ||||| || || | || || ||||| || |||||| Sbjct 118769 GTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 118728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396985771299670