Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1733 93.3 3e-14 >seq1733 Length=353299 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 |||| || | || ||||| || | |||| ||||| || || |||||| ||||||| Sbjct 118885 CGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCT 118826 Query 15080 TGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTA 15138 |||| ||| |||||||| ||| |||| |||||||| | || || || | || Sbjct 118825 TGTCTTGAATCTTTGCTTTG-ACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTT 118767 Query 15139 ATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||||||| |||| ||| ||||||||||| ||||| Sbjct 118766 ATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCAT 118729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357323027252975