Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1733 86.0 6e-12 >seq1733 Length=353299 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| ||||| || || || ||||| ||||| | || || ||||| Sbjct 117403 AAACATGCAAATCTTCGTGAAAACACTGACTGGAAAAACGATCACTCTTGAAGTGGAGGC 117462 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | ||| |||||| |||||| | ||||||||||| ||||| | || Sbjct 117463 TTCAGACACAATTGAAAATGTTAAAGCAAAAATACAAGACAAAGAGGGTATTCCGCCAGA 117522 Query 38360 CCAACAGCGGCTCAT 38374 ||| ||||| || || Sbjct 117523 CCAGCAGCGCCTTAT 117537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500073797046400