Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq316 82.4 9e-11 >seq316 Length=264756 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 169362 TTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGACC 169421 || ||||| ||||| || || || || | |||||||||||| || |||||| | || Sbjct 60479 TTACCACGAAGAGGGAACACACCGTACTTATCACGTCCAACAACACCGAGACCTGAAACA 60420 Query 169422 GCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGATTGCGCC 169481 || | | ||| ||||||||||| ||||| | ||| || ||||| | | | || | | Sbjct 60419 GCCAACGATTTGGCTGAATCACCTTCCGTAAGAATAAGCGTACATTGTGCCGAATTTTTC 60360 Query 169482 GTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACC 169519 ||||| || | ||| ||||| |||| || || | ||| Sbjct 60359 GTACCAGCATCGTTAGCGTCTTCCAGTTTTGGCACACC 60322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589864020675400