Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 6e-13 >seq2 Length=30487 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/125 (76%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 136868 ATTTTAGATTCAGAAATAGTACTAGTAGATAAAAATAAT---AAACCATTACCATTTGGC 136924 ||| | ||| ||||||| |||| | |||| ||||| | ||||| ||||| ||||| Sbjct 25182 ATTGTTGATGCAGAAATGCTACTGATTGATACAAATACTGGAAAACCGTTACCTTTTGGA 25241 Query 136925 AGTTTGGGTATACATAAAAAGAAGGAATATAATGATTCATCACTATGTTTATTTGTATTT 136984 | || ||||| |||||||||||| ||| || ||| || || | ||||||||||| || Sbjct 25242 ACATTAGGTATCCATAAAAAGAAGCAATTCAAGGATGCAGCAGTTTGTTTATTTGTTTTC 25301 Query 136985 GATTG 136989 ||||| Sbjct 25302 GATTG 25306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561997537589400