Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1733 107 2e-18 >seq1733 Length=353299 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || |||||||| || || |||||||||||||| || |||| ||| |||| Sbjct 118728 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 118787 Query 28613 AGAGACGGTGGCCGATCTC-AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || || ||||||| | || ||||| || || | || ||||| Sbjct 118788 TGATACTATCGAAAATGTCAAAGCAAAGATTC-AAGACAAGGAAGGCATTCCACCAGATC 118846 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | ||| |||| |||||||||||||| || |||| || | || || | ||||||| Sbjct 118847 AGCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACATTGTCTGATTATA 118906 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762 | ||||| || ||||| || |||||| |||| Sbjct 118907 ATATTCAGAAGGAATCGACGCTGCACCTGGT 118937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425322701526465