Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq961 91.5 4e-13 >seq961 Length=383894 Score = 91.5 bits (100), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 301816 ATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAG 301875 ||||||| || || || |||||| | || || || |||| || ||| ||||| | Sbjct 258705 ATTTCTTTAAGCCGCGGTACACCAAGTGTGACATTT---TTGGCCGAAACGCCAGCGTAA 258761 Query 301876 TGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATA 301935 || |||||||||||||| | ||||||| ||| ||||| | |||||| || || || | Sbjct 258762 TGAAAAGTATTCAGAGTCATCTGAGTAGCTGGTTCACCCAAACTTTGAGCTGCTATTGCA 258821 Query 301936 CCAACCATTTCTCCTGGTGCTACAAT 301961 ||||||||||| || ||| ||||| Sbjct 258822 CCAACCATTTCACCGGGTTGCACAAT 258847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471518988906395