Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq318 86.0 1e-11 seq1834 84.2 4e-11 seq1614 84.2 4e-11 >seq318 Length=60109 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 |||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 32543 TTAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 32486 >seq1834 Length=224686 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 96902 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 96958 >seq1614 Length=352971 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 40542 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 40598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825753320093400