Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1733 95.1 3e-14 >seq1733 Length=353299 Score = 95.1 bits (104), Expect = 3e-14 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||||| ||| || | || || ||||| || || | |||||||| |||||| Sbjct 118732 CAGAT-TTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTCTGA 118790 Query 206232 CACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 || ||||| || |||||||| ||||||||| || ||||| ||| || || | Sbjct 118791 TACTATCGAAAATGTCAAAGCAAA-GATTCAAGACAAGGAAGGCATTCCACCAGATCAGC 118849 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | |||| ||||| || || |||||| |||| || || | || ||| | ||||| || Sbjct 118850 AGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACATTGTCTGATTATAATA 118909 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 | ||||| || || || || ||||| ||| | | ||||| Sbjct 118910 TTCAGAAGGAATCGACGCTGCACCTGGTTCTTCGCCTTCG 118949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181581025179035