Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1733 118 1e-21 >seq1733 Length=353299 Score = 118 bits (130), Expect = 1e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || ||||| | ||| || || |||| ||||||||||| |||||||| Sbjct 118919 TCCTTCTGAATATTATAATCAGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAG 118860 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||| || | |||| || |||||||| |||||| || | | || Sbjct 118859 ATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTT 118800 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || | ||||| || | || || ||||||||||||||||| || ||| Sbjct 118799 TCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACA 118740 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 118739 AAAATCTGCATTC 118727 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 35595 TACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTT 35654 ||||||| || ||||| ||||||||||| | |||| | |||||||||| ||| ||| Sbjct 117880 TACCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTTG 117821 Query 35655 GCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 ||| | | | | | ||||| | |||||| |||| ||||| |||||||| || | Sbjct 117820 CCTTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAA 117761 Query 35715 AAGTTTTCACAAATATCTGCAT 35736 |||||| ||||| || ||||| Sbjct 117760 GAGTTTTAACAAAGATTTGCAT 117739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450704371041800