Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1733 129 5e-25 >seq1733 Length=353299 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| |||||||| ||||||||||| ||||| || || Sbjct 118955 CCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCAGAC 118896 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| |||| || ||||||||||| || || ||||| ||||| || || | ||| Sbjct 118895 AATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGA 118836 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | ||| | ||||||| || | | ||| || | |||||| Sbjct 118835 ATGCCTTCCTTGT-CTTGAATCTTTGCTTTGACATTTTCGATAGTATCAGAAGCCTCCAC 118777 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||||| ||||||||||||| |||||||| ||||||||||| Sbjct 118776 TTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCAT 118729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462212492702000