Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq21023 82.4 6e-11 >seq21023 Length=594 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120 |||||| ||||| | |||||| |||||||||||| || ||| |||||| | ||| Sbjct 55 CTGAAAGCCATAAATAGGTCCCAGATCTCCTTCAGATCGATCACTGAAACCACACTGATC 114 Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTT 102179 | ||| | ||||||||| ||||||||||| || || | |||| | ||| Sbjct 115 AAGAAACTGCCGAGATCCATTGGCATCCCAAATCCTGACACCTTTCTCAGATAAATGCTT 174 Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239 ||| | ||| |||| || ||||| | ||||||||||||||| ||| |||| | | Sbjct 175 TGC-ATTTGTATCGCCTCGAATGAACCATAGCAGTTCTTCAACAACGCCTTTCCAGTAGA 233 Query 102240 CTCTCTTAGTAGTTAAAAGTGGAA 102263 ||| || || || || | |||| Sbjct 234 CTCGTTTGGTTGTCAATACCGGAA 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361145696925713